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Supplementary Materials

These are supplementary files for the PiGx paper.

PiGx scRNA-seq

The HTML report output of the scRNA-seq pipeline from the analysis of the single cell sequencing dataset from (Hu et al. 2017) can be accessed here.

PiGx ChIP-seq

The HTML report output of the ChIP-seq pipeline from the analysis of the ChIP-seq datasets from Hon. et al can be accessed here.

PiGx RNA-seq

Below are links for the HTML reports for each differential expression analysis performed using STAR-based gene counts for the use-case RNA-seq datasets:

PiGx BS-seq

The supplementary results for the BS-seq pipeline from the analysis of the RNA-seq datasets from Hon. et al consist of three reports in HTML format; We have highlighted the most important figures from the study.

Each HTML document represents a stand-alone summary of some the key findings for the given sample, along with a description of the key operations carried out by the pipeline.

About PiGx

PiGx is free software under the GNU General Public License (version 3 or, at your option, any later version). You can get the complete source code here. Your contributions are welcome!

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